Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein | DCP16_23135 | Not Available | Positive | 4937243 - 4938070 | 29564.3 |
| amino acid abc transporter atp-binding protein | DCP16_23140 | Not Available | Positive | 4938234 - 4939742 | 54296.2 |
| nad-binding protein | DCP16_23145 | Not Available | Positive | 4939761 - 4940768 | 36241.3 |
| d-amino-acid oxidase | DCP16_23150 | Not Available | Positive | 4940814 - 4941944 | 39259.6 |
| duf2218 domain-containing protein | DCP16_23155 | Not Available | Negative | 4942008 - 4942295 | 10857.9 |
| alpha-glucosidase | DCP16_23160 | Not Available | Negative | 4942507 - 4944498 | 74660.7 |
| sugar abc transporter permease | DCP16_23165 | Not Available | Negative | 4944579 - 4945433 | 30725.7 |
| sugar abc transporter permease | DCP16_23170 | Not Available | Negative | 4945437 - 4946366 | 33978.3 |
| sugar abc transporter substrate-binding protein | DCP16_23175 | Not Available | Negative | 4946443 - 4947669 | 44036.5 |
| glycerol-3-phosphate abc transporter atp-binding protein | DCP16_23180 | Not Available | Negative | 4947721 - 4948797 | 38787.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
