Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbf | DCP16_22770 | Not Available | Negative | 4863800 - 4864462 | 24685.2 |
| p-type conjugative transfer protein trbl | DCP16_22775 | Not Available | Negative | 4864478 - 4865668 | 40068.4 |
| entry exclusion protein trbk | DCP16_22780 | Not Available | Negative | 4865662 - 4865895 | 8309.72 |
| p-type conjugative transfer protein trbj | DCP16_22785 | Not Available | Negative | 4865892 - 4866701 | 29757.9 |
| conjugal transfer protein trbe | DCP16_22790 | Not Available | Negative | 4866673 - 4869141 | 91714.8 |
| conjugal transfer protein trbd | DCP16_22795 | Not Available | Negative | 4869153 - 4869452 | 11238.0 |
| conjugal transfer protein trbc | DCP16_22800 | Not Available | Negative | 4869445 - 4869855 | 13457.3 |
| p-type conjugative transfer atpase trbb | DCP16_22805 | Not Available | Negative | 4869845 - 4870816 | 34908.9 |
| autoinducer synthesis protein | DCP16_22810 | Not Available | Negative | 4870813 - 4871451 | 23051.7 |
| plasmid partitioning protein repa | DCP16_22815 | Not Available | Positive | 4871816 - 4873003 | 44428.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
