Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DCP16_22670 | Not Available | Negative | 4841230 - 4842225 | 34949.1 |
| sugar abc transporter atp-binding protein | DCP16_22675 | Not Available | Negative | 4842222 - 4843727 | 54511.1 |
| tmao reductase system periplasmic protein tort | DCP16_22680 | Not Available | Negative | 4843833 - 4844894 | 37309.6 |
| histone deacetylase family protein | DCP16_22685 | Not Available | Negative | 4845452 - 4846513 | 38183.9 |
| succinate-semialdehyde dehydrogenase (nadp(+)) | DCP16_22690 | Not Available | Negative | 4846515 - 4847993 | 52520.9 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | DCP16_22695 | Not Available | Negative | 4848012 - 4849094 | 39823.9 |
| amidase | DCP16_22700 | Not Available | Negative | 4849118 - 4850554 | 50721.1 |
| aspartate aminotransferase family protein | DCP16_22705 | Not Available | Negative | 4850563 - 4851927 | 48970.8 |
| gntr family transcriptional regulator | DCP16_22710 | Not Available | Positive | 4852085 - 4852762 | 25011.3 |
| short-chain dehydrogenase | DCP16_22715 | Not Available | Negative | 4852781 - 4853533 | 26200.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
