Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease accessory protein uref | DCP16_01850 | Not Available | Positive | 374266 - 374937 | 23709.2 |
| urease accessory protein ureg | DCP16_01855 | Not Available | Positive | 375019 - 375630 | 21710.1 |
| crp/fnr family transcriptional regulator | DCP16_01860 | Not Available | Negative | 375689 - 376396 | 26052.5 |
| addiction module antidote protein, higa family | DCP16_01865 | Not Available | Negative | 376589 - 376894 | 11134.6 |
| killer protein | DCP16_01870 | Not Available | Negative | 376906 - 377187 | 10452.5 |
| abc transporter permease | DCP16_01875 | Not Available | Negative | 377349 - 380672 | 120206.0 |
| efflux transporter periplasmic adaptor subunit | DCP16_01880 | Not Available | Negative | 380688 - 381878 | 41021.1 |
| duf2325 domain-containing protein | DCP16_01885 | Not Available | Positive | 382343 - 382747 | 14757.6 |
| beta-glucosidase | DCP16_01890 | Not Available | Negative | 382934 - 384262 | 49894.8 |
| peptide abc transporter | DCP16_01895 | Not Available | Negative | 384350 - 385873 | 55562.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
