Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein | DCP16_21670 | Not Available | Positive | 4621133 - 4621477 | 11909.7 |
| type vi secretion protein | DCP16_21675 | Not Available | Positive | 4621477 - 4621770 | 11127.0 |
| hypothetical protein | DCP16_21685 | Not Available | Positive | 4624189 - 4624836 | 22222.4 |
| type vi secretion protein | DCP16_21690 | Not Available | Positive | 4624837 - 4625583 | 25755.4 |
| type iv secretion protein | DCP16_21695 | Not Available | Positive | 4625717 - 4626790 | 37332.3 |
| type vi secretion protein | DCP16_21700 | Not Available | Positive | 4626810 - 4627550 | 27498.3 |
| conjugal transfer protein | DCP16_21705 | Not Available | Positive | 4627547 - 4628350 | 29486.5 |
| conjugal transfer protein | DCP16_21710 | Not Available | Positive | 4628340 - 4629587 | 44251.6 |
| p-type dna transfer atpase virb11 | DCP16_21715 | Not Available | Positive | 4629547 - 4630623 | 39960.3 |
| trag protein | DCP16_21720 | Not Available | Positive | 4630620 - 4633058 | 89662.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
