Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase family protein | DCP16_21290 | Not Available | Positive | 4541148 - 4542674 | 53601.3 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | DCP16_21295 | Not Available | Negative | 4542739 - 4546422 | 131170.0 |
| arsr family transcriptional regulator | DCP16_21300 | Not Available | Positive | 4546583 - 4547053 | 17617.4 |
| rna polymerase subunit sigma | DCP16_21305 | Not Available | Negative | 4547096 - 4547662 | 21114.0 |
| hypothetical protein | DCP16_21310 | Not Available | Negative | 4547662 - 4547862 | 7273.34 |
| response regulator | DCP16_21315 | Not Available | Positive | 4548000 - 4548794 | 28867.7 |
| sensor histidine kinase | DCP16_21320 | Not Available | Positive | 4548903 - 4549901 | 37623.7 |
| histidine kinase | DCP16_21325 | Not Available | Negative | 4550425 - 4552041 | 59112.7 |
| photosystem reaction center subunit h | DCP16_21330 | Not Available | Positive | 4552380 - 4552958 | 19119.4 |
| udp-glucose 4-epimerase gale | DCP16_21335 | Not Available | Negative | 4553054 - 4554037 | 36310.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
