Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | DCP16_21240 | Not Available | Positive | 4531385 - 4532410 | 36911.2 |
| iron abc transporter permease | DCP16_21245 | Not Available | Positive | 4532415 - 4533434 | 34837.7 |
| histidinol phosphatase | DCP16_21250 | Not Available | Positive | 4533431 - 4534219 | 28860.1 |
| pseudoazurin | DCP16_21255 | Not Available | Positive | 4534216 - 4534674 | 16438.1 |
| hypothetical protein | DCP16_21260 | Not Available | Positive | 4534866 - 4535177 | 11112.2 |
| udp-glucuronate 5-epimerase | DCP16_21265 | Not Available | Negative | 4535196 - 4536212 | 37769.4 |
| udp-glucose/gdp-mannose dehydrogenase family protein | DCP16_21270 | Not Available | Negative | 4536231 - 4537541 | 46934.2 |
| adenylate/guanylate cyclase domain-containing protein | DCP16_21275 | Not Available | Positive | 4537755 - 4538969 | 45026.4 |
| eama/rhat family transporter | DCP16_21280 | Not Available | Positive | 4539164 - 4540051 | 32197.3 |
| lysr family transcriptional regulator | DCP16_21285 | Not Available | Negative | 4540079 - 4540981 | 33525.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
