Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate abc transporter atp-binding protein | DCP16_21190 | Not Available | Negative | 4518011 - 4518808 | 29680.2 |
| nitrate abc transporter, permease protein | DCP16_21195 | Not Available | Negative | 4518821 - 4519717 | 31942.6 |
| bicarbonate-binding protein | DCP16_21200 | Not Available | Negative | 4519795 - 4521093 | 46811.1 |
| abc transporter substrate-binding protein | DCP16_21205 | Not Available | Negative | 4521458 - 4522729 | 45547.0 |
| two-component system response regulator | DCP16_21210 | Not Available | Negative | 4522758 - 4523345 | 21792.8 |
| gntr family transcriptional regulator | DCP16_21215 | Not Available | Positive | 4523502 - 4524209 | 25810.7 |
| aspartate ammonia-lyase | DCP16_21220 | Not Available | Negative | 4524273 - 4525703 | 50570.9 |
| amino acid permease | DCP16_21225 | Not Available | Positive | 4525930 - 4527432 | 53955.0 |
| l-asparaginase | DCP16_21230 | Not Available | Positive | 4527468 - 4528391 | 31282.2 |
| membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate family | DCP16_21235 | Not Available | Positive | 4528493 - 4530832 | 84172.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
