Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease subunit gamma | DCP16_01800 | Not Available | Positive | 364067 - 364369 | 11126.6 |
| hypothetical protein | DCP16_01805 | Not Available | Positive | 364373 - 364852 | 18428.4 |
| urease subunit beta | DCP16_01810 | Not Available | Positive | 364849 - 365154 | 11082.4 |
| urease-associated protein | DCP16_01815 | Not Available | Positive | 365154 - 365582 | 15456.2 |
| urease subunit alpha | DCP16_01820 | Not Available | Positive | 365682 - 367391 | 60801.9 |
| alpha-ketoglutarate permease | DCP16_01825 | Not Available | Negative | 367623 - 368942 | 47752.7 |
| sensor histidine kinase | DCP16_01830 | Not Available | Positive | 369311 - 371062 | 62802.0 |
| fis family transcriptional regulator | DCP16_01835 | Not Available | Positive | 371059 - 372381 | 48226.4 |
| ggdef domain-containing protein | DCP16_01840 | Not Available | Positive | 372723 - 373556 | 29860.2 |
| urease accessory protein uree | DCP16_01845 | Not Available | Positive | 373756 - 374262 | 18862.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
