Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr02300 family protein | DCP16_21140 | Not Available | Negative | 4504786 - 4505172 | 14078.2 |
| (d)cmp kinase | DCP16_21145 | Not Available | Positive | 4505399 - 4506031 | 22437.8 |
| 30s ribosomal protein s1 | DCP16_21150 | Not Available | Positive | 4506200 - 4507900 | 62292.2 |
| hypothetical protein | DCP16_21155 | Not Available | Negative | 4508016 - 4509629 | 55355.7 |
| ribonuclease d | DCP16_21160 | Not Available | Negative | 4509852 - 4510478 | 23129.5 |
| nucleoside 2-deoxyribosyltransferase | DCP16_21165 | Not Available | Positive | 4510736 - 4511305 | 20403.5 |
| nadp-dependent 3-hydroxy acid dehydrogenase | DCP16_21170 | Not Available | Positive | 4511332 - 4512084 | 27085.4 |
| nitrate reductase | DCP16_21175 | Not Available | Negative | 4512452 - 4515109 | 95788.4 |
| nitrite reductase (nad(p)h) small subunit | DCP16_21180 | Not Available | Negative | 4515112 - 4515441 | 11649.0 |
| nitrite reductase large subunit | DCP16_21185 | Not Available | Negative | 4515545 - 4518004 | 89404.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
