Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxybutyrate dehydrogenase | DCP16_21090 | Not Available | Negative | 4494021 - 4495157 | 39588.9 |
| lysr family transcriptional regulator | DCP16_21095 | Not Available | Positive | 4495318 - 4496235 | 33973.1 |
| d-lactate dehydrogenase | DCP16_21100 | Not Available | Positive | 4496404 - 4498161 | 64489.7 |
| marr family transcriptional regulator | DCP16_21105 | Not Available | Negative | 4498173 - 4498679 | 19407.3 |
| fad-dependent oxidoreductase | DCP16_21110 | Not Available | Negative | 4498697 - 4500286 | 56359.5 |
| cyclase | DCP16_21115 | Not Available | Negative | 4500385 - 4501170 | 28038.1 |
| marr family transcriptional regulator | DCP16_21120 | Not Available | Positive | 4501698 - 4502204 | 19081.0 |
| hypothetical protein | DCP16_21125 | Not Available | Negative | 4502278 - 4502538 | 9084.26 |
| imma/irre family metallo-endopeptidase | DCP16_21130 | Not Available | Positive | 4502834 - 4504153 | 49605.0 |
| Trna-ala | Not Available | Not Available | Positive | 4504558 - 4504633 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
