Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DCP16_20630 | Not Available | Negative | 4390048 - 4391004 | 33461.9 |
| glycosyl hydrolase | DCP16_20635 | Not Available | Negative | 4391006 - 4392196 | 43365.7 |
| peptide abc transporter substrate-binding protein | DCP16_20640 | Not Available | Positive | 4392529 - 4394040 | 55680.4 |
| abc transporter permease | DCP16_20645 | Not Available | Positive | 4394136 - 4395050 | 32892.2 |
| abc transporter permease | DCP16_20650 | Not Available | Positive | 4395063 - 4395986 | 34158.0 |
| abc transporter atp-binding protein | DCP16_20655 | Not Available | Positive | 4395979 - 4397598 | 59099.9 |
| dihydrodipicolinate synthase family protein | DCP16_20660 | Not Available | Positive | 4397625 - 4398515 | 31652.8 |
| Trna-met | Not Available | Not Available | Positive | 4399633 - 4399709 | Not Available |
| transferase | DCP16_20680 | Not Available | Positive | 4400185 - 4400778 | 20805.2 |
| hypothetical protein | DCP16_20685 | Not Available | Positive | 4401208 - 4401903 | 26427.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
