Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system atpase tssh | DCP16_20370 | Not Available | Positive | 4331852 - 4334518 | 96702.4 |
| hcp1 family type vi secretion system effector | DCP16_20375 | Not Available | Positive | 4334563 - 4335039 | 17265.2 |
| hypothetical protein | DCP16_20380 | Not Available | Positive | 4335273 - 4335668 | 14101.9 |
| type vi secretion system tip protein vgrg | DCP16_20385 | Not Available | Positive | 4335836 - 4338229 | 86944.7 |
| hypothetical protein | DCP16_20390 | Not Available | Positive | 4338233 - 4339297 | 40583.9 |
| hypothetical protein | DCP16_20395 | Not Available | Positive | 4339294 - 4340142 | 29612.3 |
| hypothetical protein | DCP16_20400 | Not Available | Positive | 4340208 - 4340729 | 19176.8 |
| hypothetical protein | DCP16_20405 | Not Available | Positive | 4340746 - 4341462 | 26009.4 |
| hypothetical protein | DCP16_20410 | Not Available | Positive | 4341481 - 4341786 | 10448.7 |
| hypothetical protein | DCP16_20415 | Not Available | Positive | 4342074 - 4342685 | 22791.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
