Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | DCP16_01700 | Not Available | Positive | 342259 - 343161 | 32274.8 |
| high-affinity branched-chain amino acid abc transporter permease livm | DCP16_01705 | Not Available | Positive | 343166 - 344560 | 50867.5 |
| abc transporter atp-binding protein | DCP16_01710 | Not Available | Positive | 344560 - 345426 | 31530.1 |
| abc transporter atp-binding protein | DCP16_01715 | Not Available | Positive | 345423 - 346151 | 26556.7 |
| hypothetical protein | DCP16_01720 | Not Available | Positive | 346405 - 346758 | 13527.6 |
| branched-chain amino acid abc transporter substrate-binding protein | DCP16_01725 | Not Available | Positive | 346875 - 347993 | 38688.9 |
| hypothetical protein | DCP16_01730 | Not Available | Positive | 348253 - 348489 | 9144.24 |
| atpase | DCP16_01735 | Not Available | Negative | 348742 - 349275 | 19959.5 |
| dna-binding response regulator | DCP16_01740 | Not Available | Negative | 349529 - 350440 | 32827.3 |
| hybrid sensor histidine kinase/response regulator | DCP16_01745 | Not Available | Negative | 350437 - 353832 | 123300.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
