Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase hrpb | DCP16_19715 | Not Available | Negative | 4174575 - 4177061 | 90020.5 |
| ornithine cyclodeaminase family protein | DCP16_19720 | Not Available | Negative | 4177066 - 4178016 | 33988.8 |
| sensor histidine kinase | DCP16_19730 | Not Available | Negative | 4179866 - 4181236 | 49792.6 |
| dna-binding response regulator | DCP16_19735 | Not Available | Negative | 4181233 - 4181895 | 24164.1 |
| hypothetical protein | DCP16_19740 | Not Available | Positive | 4182031 - 4182537 | 17482.9 |
| tetr family transcriptional regulator | DCP16_19745 | Not Available | Negative | 4182642 - 4183289 | 24069.6 |
| tet(a)/tet(b)/tet(c) family tetracycline efflux mfs transporter | DCP16_19750 | Not Available | Positive | 4183375 - 4184589 | 42875.2 |
| cytosine deaminase | DCP16_19755 | Not Available | Negative | 4184606 - 4185814 | 42906.0 |
| abc transporter atp-binding protein | DCP16_19760 | Not Available | Negative | 4185880 - 4186857 | 35738.2 |
| methionine abc transporter atp-binding protein | DCP16_19765 | Not Available | Negative | 4186854 - 4187852 | 35336.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
