Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2628 domain-containing protein | DCP16_19665 | Not Available | Negative | 4164400 - 4164888 | 18321.1 |
| imidazoleglycerol-phosphate dehydratase hisb | DCP16_19670 | Not Available | Negative | 4164950 - 4165546 | 21614.8 |
| atp-dependent protease subunit hslv | DCP16_19675 | Not Available | Positive | 4165760 - 4166284 | 18628.5 |
| atp-dependent protease atpase subunit hslu | DCP16_19680 | Not Available | Positive | 4166363 - 4167670 | 48022.6 |
| hypothetical protein | DCP16_19685 | Not Available | Positive | 4167844 - 4168797 | 35203.4 |
| malate synthase g | DCP16_19690 | Not Available | Positive | 4168895 - 4171084 | 79830.3 |
| l,d-transpeptidase | DCP16_19695 | Not Available | Negative | 4171198 - 4171884 | 24906.9 |
| dna repair protein mmcb-related protein | DCP16_19700 | Not Available | Positive | 4172067 - 4172552 | 18339.2 |
| dna-binding response regulator | DCP16_19705 | Not Available | Negative | 4172568 - 4173152 | 21572.6 |
| two-component sensor histidine kinase | DCP16_19710 | Not Available | Negative | 4173249 - 4174556 | 47553.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
