Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine kinase | DCP16_19615 | Not Available | Negative | 4155251 - 4155715 | 16544.0 |
| hamp domain-containing protein | DCP16_19620 | Not Available | Negative | 4155705 - 4157495 | 65721.8 |
| dna-binding response regulator | DCP16_19625 | Not Available | Negative | 4157538 - 4158263 | 27200.8 |
| phosphoenolpyruvate carboxykinase (atp) | DCP16_19630 | Not Available | Positive | 4158604 - 4160214 | 57873.6 |
| aminoacyl-trna hydrolase | DCP16_19635 | Not Available | Positive | 4160422 - 4160856 | 15837.3 |
| type i pantothenate kinase | DCP16_19640 | Not Available | Negative | 4160897 - 4161865 | 37062.4 |
| phosphoribosyl-atp diphosphatase | DCP16_19645 | Not Available | Negative | 4161895 - 4162218 | 11541.7 |
| imidazole glycerol phosphate synthase subunit hisf | DCP16_19650 | Not Available | Negative | 4162239 - 4163015 | 27266.5 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | DCP16_19655 | Not Available | Negative | 4163012 - 4163746 | 25684.0 |
| imidazole glycerol phosphate synthase subunit hish | DCP16_19660 | Not Available | Negative | 4163748 - 4164398 | 23177.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
