Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | DCP16_19515 | Not Available | Positive | 4128212 - 4128577 | 13364.1 |
| dna topoisomerase (atp-hydrolyzing) subunit b | DCP16_19520 | Not Available | Positive | 4128738 - 4131173 | 88942.9 |
| nitroreductase | DCP16_19525 | Not Available | Negative | 4131450 - 4132049 | 21976.9 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | DCP16_19530 | Not Available | Positive | 4132182 - 4133024 | 29688.6 |
| polyhydroxyalkanoate depolymerase | DCP16_19535 | Not Available | Positive | 4133190 - 4134425 | 46290.5 |
| hypothetical protein | DCP16_19540 | Not Available | Positive | 4134470 - 4135237 | 28543.6 |
| phosphoribosylanthranilate isomerase | DCP16_19545 | Not Available | Positive | 4135340 - 4135999 | 23163.6 |
| tryptophan synthase subunit beta | DCP16_19550 | Not Available | Positive | 4136011 - 4137231 | 43935.8 |
| tryptophan synthase subunit alpha | DCP16_19555 | Not Available | Positive | 4137233 - 4138060 | 29152.1 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | DCP16_19560 | Not Available | Positive | 4138226 - 4139119 | 32730.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
