Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kinase/pyrophosphorylase | DCP16_19465 | Not Available | Positive | 4120772 - 4121593 | 30485.7 |
| septum formation inhibitor maf | DCP16_19470 | Not Available | Positive | 4121728 - 4122327 | 21314.7 |
| shikimate dehydrogenase | DCP16_19475 | Not Available | Positive | 4122320 - 4123180 | 31382.2 |
| dephospho-coa kinase | DCP16_19480 | Not Available | Positive | 4123177 - 4123767 | 21668.2 |
| dna polymerase iii subunit epsilon | DCP16_19485 | Not Available | Positive | 4123831 - 4124535 | 26425.5 |
| protein-export chaperone secb | DCP16_19490 | Not Available | Negative | 4124618 - 4125100 | 17405.8 |
| membrane protein fxsa | DCP16_19495 | Not Available | Negative | 4125185 - 4125694 | 18449.0 |
| calcium-binding protein | DCP16_19500 | Not Available | Positive | 4125881 - 4126528 | 24076.4 |
| transglycosylase | DCP16_19505 | Not Available | Positive | 4126525 - 4127640 | 41315.8 |
| dna mismatch repair protein muts | DCP16_19510 | Not Available | Positive | 4127640 - 4128215 | 21358.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
