Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase ii | DCP16_19215 | Not Available | Negative | 4055307 - 4056191 | 32998.4 |
| ubiquinone biosynthesis hydroxylase | DCP16_19220 | Not Available | Positive | 4056284 - 4057498 | 43294.1 |
| helicase | DCP16_19225 | Not Available | Positive | 4057852 - 4060929 | 112931.0 |
| rna-binding s4 domain-containing protein | DCP16_19230 | Not Available | Positive | 4060934 - 4061350 | 15760.9 |
| ferredoxin family protein | DCP16_19235 | Not Available | Positive | 4061508 - 4061846 | 12486.7 |
| dna polymerase iii subunit delta | DCP16_19240 | Not Available | Negative | 4061930 - 4062967 | 37909.6 |
| hypothetical protein | DCP16_19245 | Not Available | Negative | 4062977 - 4063525 | 19671.4 |
| leucine--trna ligase | DCP16_19250 | Not Available | Negative | 4063515 - 4066145 | 98409.0 |
| yggs family pyridoxal phosphate-dependent enzyme | DCP16_19255 | Not Available | Positive | 4066446 - 4067105 | 23681.4 |
| hypothetical protein | DCP16_19260 | Not Available | Positive | 4067198 - 4067392 | 7487.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
