Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-5-semialdehyde dehydrogenase | DCP16_19065 | Not Available | Positive | 4020754 - 4021995 | 43292.2 |
| nicotinic acid mononucleotide adenylyltransferase | DCP16_19070 | Not Available | Positive | 4022037 - 4022633 | 22043.5 |
| ribosome silencing factor | DCP16_19075 | Not Available | Positive | 4022697 - 4023170 | 17291.6 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | DCP16_19080 | Not Available | Positive | 4023374 - 4023856 | 17572.3 |
| hypothetical protein | DCP16_19085 | Not Available | Positive | 4024076 - 4025404 | 48013.9 |
| s41 family peptidase | DCP16_19090 | Not Available | Positive | 4025394 - 4026722 | 47231.6 |
| hypothetical protein | DCP16_19095 | Not Available | Positive | 4026804 - 4027994 | 41894.0 |
| rna pyrophosphohydrolase | DCP16_19100 | Not Available | Positive | 4028031 - 4028540 | 19158.8 |
| bacterioferritin | DCP16_19105 | Not Available | Negative | 4028610 - 4029125 | 19556.1 |
| (2fe-2s)-binding protein | DCP16_19110 | Not Available | Negative | 4029067 - 4029378 | 12191.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
