Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell envelope biogenesis protein ompa | DCP16_18865 | Not Available | Negative | 3976792 - 3977454 | 22750.1 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | DCP16_18870 | Not Available | Negative | 3977523 - 3978773 | 44740.8 |
| mfs transporter | DCP16_18875 | Not Available | Negative | 3979062 - 3980249 | 40942.5 |
| deor family transcriptional regulator | DCP16_18880 | Not Available | Negative | 3980246 - 3981070 | 29018.0 |
| pyruvate carboxylase | DCP16_18885 | Not Available | Negative | 3981185 - 3984646 | 126530.0 |
| luxr family transcriptional regulator | DCP16_18890 | Not Available | Negative | 3984769 - 3985539 | 29086.3 |
| glucan abc transporter atp-binding protein/ permease | DCP16_18895 | Not Available | Positive | 3985849 - 3987633 | 65546.0 |
| duf1013 domain-containing protein | DCP16_18900 | Not Available | Negative | 3987942 - 3988625 | 25477.0 |
| acetate--coa ligase | DCP16_18905 | Not Available | Positive | 3988874 - 3990832 | 72616.6 |
| trap transporter substrate-binding protein | DCP16_18910 | Not Available | Negative | 3990925 - 3991932 | 36920.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
