Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| basic amino acid abc transporter substrate-binding protein | DCP16_18765 | Not Available | Negative | 3956602 - 3957396 | 28710.3 |
| 50s ribosomal protein l19 | DCP16_18770 | Not Available | Negative | 3957610 - 3958155 | 19550.2 |
| sulfite exporter taue/safe family protein | DCP16_18775 | Not Available | Positive | 3958417 - 3959163 | 25748.2 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DCP16_18780 | Not Available | Negative | 3959145 - 3959843 | 25227.4 |
| ribosome maturation factor rimm | DCP16_18785 | Not Available | Negative | 3959848 - 3960423 | 20657.3 |
| 30s ribosomal protein s16 | DCP16_18790 | Not Available | Negative | 3960558 - 3960935 | 13637.4 |
| chorismate mutase | DCP16_18795 | Not Available | Negative | 3960968 - 3961285 | 11995.3 |
| signal recognition particle protein | DCP16_18800 | Not Available | Negative | 3961294 - 3962862 | 55001.2 |
| hypothetical protein | DCP16_18805 | Not Available | Positive | 3963199 - 3964272 | 39843.3 |
| metalloprotease | DCP16_18810 | Not Available | Negative | 3964315 - 3965793 | 53420.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
