Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | DCP16_18715 | Not Available | Negative | 3946046 - 3947233 | 42612.1 |
| hypothetical protein | DCP16_18720 | Not Available | Negative | 3947327 - 3947923 | 22372.6 |
| septation protein a | DCP16_18725 | Not Available | Negative | 3947920 - 3948570 | 24476.7 |
| signal recognition particle-docking protein ftsy | DCP16_18730 | Not Available | Negative | 3948573 - 3950045 | 51683.1 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | DCP16_18735 | Not Available | Negative | 3950068 - 3951342 | 46623.2 |
| diaminopimelate epimerase | DCP16_18740 | Not Available | Negative | 3951339 - 3952271 | 33747.1 |
| 3-isopropylmalate dehydratase large subunit | DCP16_18745 | Not Available | Negative | 3952597 - 3954006 | 50889.6 |
| hypothetical protein | DCP16_18750 | Not Available | Negative | 3954072 - 3954194 | 4396.41 |
| mfs transporter | DCP16_18755 | Not Available | Positive | 3954452 - 3955744 | 46872.1 |
| amino acid abc transporter | DCP16_18760 | Not Available | Negative | 3955750 - 3956565 | 30078.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
