Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2867 domain-containing protein | DCP16_18415 | Not Available | Negative | 3883906 - 3884388 | 17636.6 |
| choline transporter | DCP16_18420 | Not Available | Positive | 3884630 - 3886627 | 73815.0 |
| cytochrome b | DCP16_18425 | Not Available | Negative | 3886700 - 3887194 | 18391.1 |
| dihydrolipoyl dehydrogenase | DCP16_18430 | Not Available | Negative | 3887325 - 3888731 | 48678.9 |
| nad(p)-dependent oxidoreductase | DCP16_18435 | Not Available | Negative | 3888756 - 3889508 | 25839.7 |
| lysine transporter lyse | DCP16_18440 | Not Available | Negative | 3889541 - 3890146 | 21913.5 |
| hypothetical protein | DCP16_18445 | Not Available | Negative | 3890193 - 3890606 | 15070.0 |
| dihydrolipoamide succinyltransferase | DCP16_18450 | Not Available | Negative | 3890676 - 3891920 | 43006.9 |
| 2-oxoglutarate dehydrogenase e1 component | DCP16_18455 | Not Available | Negative | 3891976 - 3894972 | 112062.0 |
| succinate--coa ligase subunit alpha | DCP16_18460 | Not Available | Negative | 3895228 - 3896130 | 30945.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
