Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCP16_01495 | Not Available | Negative | 305599 - 305859 | 9320.23 |
| tripartite tricarboxylate transporter permease | DCP16_01500 | Not Available | Negative | 305989 - 307506 | 52636.6 |
| tripartite tricarboxylate transporter tctb family protein | DCP16_01505 | Not Available | Negative | 307598 - 308092 | 17708.0 |
| c4-dicarboxylate abc transporter substrate-binding protein | DCP16_01510 | Not Available | Negative | 308089 - 309033 | 32176.5 |
| iron abc transporter | DCP16_01515 | Not Available | Negative | 309442 - 310521 | 39593.5 |
| dna-binding response regulator | DCP16_01520 | Not Available | Positive | 310633 - 311313 | 24572.6 |
| sensor histidine kinase | DCP16_01525 | Not Available | Positive | 311310 - 312683 | 48980.4 |
| hypothetical protein | DCP16_01530 | Not Available | Negative | 312739 - 313098 | 12205.8 |
| formyltetrahydrofolate deformylase | DCP16_01535 | Not Available | Negative | 313303 - 314187 | 32839.4 |
| heme utilization cystosolic carrier protein hutx | DCP16_01540 | Not Available | Negative | 314406 - 314939 | 19223.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
