Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter permease lptf | DCP16_17290 | Not Available | Negative | 3651355 - 3652524 | 42875.6 |
| leucyl aminopeptidase | DCP16_17295 | Not Available | Positive | 3652820 - 3654310 | 52200.8 |
| dna polymerase iii subunit chi | DCP16_17300 | Not Available | Positive | 3654340 - 3654789 | 16739.6 |
| calcium-binding protein | DCP16_17305 | Not Available | Negative | 3654802 - 3655728 | 33195.2 |
| gntr family transcriptional regulator | DCP16_17310 | Not Available | Negative | 3655762 - 3656460 | 25711.7 |
| oxidoreductase | DCP16_17315 | Not Available | Positive | 3656580 - 3657626 | 36825.7 |
| oxidoreductase | DCP16_17320 | Not Available | Positive | 3657626 - 3658642 | 37423.5 |
| gfo/idh/moca family oxidoreductase | DCP16_17325 | Not Available | Positive | 3658639 - 3659718 | 38395.8 |
| abc transporter substrate-binding protein | DCP16_17330 | Not Available | Positive | 3659838 - 3661112 | 46140.6 |
| sugar abc transporter permease | DCP16_17335 | Not Available | Positive | 3661170 - 3662138 | 35772.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
