Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-associated lipoprotein pal | DCP16_01395 | Not Available | Positive | 282952 - 283488 | 18906.4 |
| tol-pal system protein ybgf | DCP16_01400 | Not Available | Positive | 283661 - 284662 | 34662.3 |
| trna lysidine(34) synthetase tils | DCP16_01405 | Not Available | Positive | 284683 - 286011 | 47924.4 |
| atp-dependent metallopeptidase ftsh/yme1/tma family protein | DCP16_01410 | Not Available | Positive | 286142 - 288088 | 70907.0 |
| phosphoglucosamine mutase | DCP16_01415 | Not Available | Positive | 288524 - 289876 | 48515.5 |
| ggdef-domain containing protein | DCP16_01420 | Not Available | Negative | 290248 - 292098 | 67861.3 |
| hypothetical protein | DCP16_01425 | Not Available | Positive | 292704 - 293498 | 28312.4 |
| phosphoserine transaminase | DCP16_01430 | Not Available | Positive | 293707 - 294885 | 42342.0 |
| phosphoglycerate dehydrogenase | DCP16_01435 | Not Available | Positive | 294966 - 296561 | 56492.5 |
| hypothetical protein | DCP16_01440 | Not Available | Positive | 296766 - 297842 | 37378.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
