Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-binding protein lysm | DCP16_17085 | Not Available | Negative | 3610430 - 3612481 | 70582.0 |
| tigr00730 family rossman fold protein | DCP16_17090 | Not Available | Positive | 3612637 - 3613257 | 22649.5 |
| eama family transporter rard | DCP16_17095 | Not Available | Negative | 3613274 - 3614188 | 32900.5 |
| prolyl aminopeptidase | DCP16_17100 | Not Available | Negative | 3614430 - 3615386 | 35939.6 |
| aldehyde-activating protein | DCP16_17105 | Not Available | Negative | 3615435 - 3615875 | 16171.3 |
| aldehyde-activating protein | DCP16_17110 | Not Available | Negative | 3615875 - 3616348 | 17269.3 |
| cysteine--trna ligase | DCP16_17115 | Not Available | Negative | 3616545 - 3617930 | 51211.0 |
| hypothetical protein | DCP16_17120 | Not Available | Positive | 3617983 - 3618162 | 6556.79 |
| kr domain-containing protein | DCP16_17125 | Not Available | Negative | 3618140 - 3618880 | 26124.6 |
| amidophosphoribosyltransferase | DCP16_17130 | Not Available | Negative | 3619011 - 3620504 | 54097.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
