Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2339 domain-containing protein | DCP16_16985 | Not Available | Negative | 3590292 - 3593087 | 98563.9 |
| ring-cleaving dioxygenase | DCP16_16990 | Not Available | Negative | 3593186 - 3594751 | 57287.1 |
| abc transporter substrate-binding protein | DCP16_16995 | Not Available | Positive | 3595036 - 3596076 | 37197.0 |
| nitrate abc transporter atp-binding protein | DCP16_17000 | Not Available | Positive | 3596360 - 3597115 | 27969.5 |
| abc transporter permease | DCP16_17005 | Not Available | Positive | 3597112 - 3597930 | 29450.0 |
| marr family transcriptional regulator | DCP16_17010 | Not Available | Negative | 3598072 - 3599013 | 34323.8 |
| mechanosensitive ion channel protein | DCP16_17015 | Not Available | Negative | 3599078 - 3599914 | 29889.4 |
| protein tyrosine phosphatase | DCP16_17020 | Not Available | Negative | 3599980 - 3600510 | 19296.6 |
| hydrolase | DCP16_17025 | Not Available | Negative | 3600507 - 3601118 | 22442.0 |
| folate-binding protein ygfz | DCP16_17030 | Not Available | Negative | 3601122 - 3601970 | 29900.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
