Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein | DCP16_16785 | Not Available | Negative | 3549618 - 3549827 | 7475.76 |
| glycoside hydrolase | DCP16_16790 | Not Available | Negative | 3550212 - 3551369 | 42523.8 |
| transcriptional initiation protein tat | DCP16_16795 | Not Available | Negative | 3551626 - 3553536 | 69463.0 |
| asnc family transcriptional regulator | DCP16_16800 | Not Available | Negative | 3553657 - 3554148 | 17758.6 |
| lyse family translocator | DCP16_16805 | Not Available | Positive | 3554278 - 3554910 | 22237.7 |
| duf2147 domain-containing protein | DCP16_16810 | Not Available | Negative | 3554986 - 3555324 | 11512.9 |
| sel1 repeat family protein | DCP16_16815 | Not Available | Positive | 3555828 - 3556094 | 9515.55 |
| pyridoxal phosphate-dependent aminotransferase | DCP16_16820 | Not Available | Negative | 3556280 - 3557392 | 39768.7 |
| hypothetical protein | DCP16_16825 | Not Available | Negative | 3557522 - 3557875 | 13508.3 |
| pyridine nucleotide-disulfide oxidoreductase | DCP16_16830 | Not Available | Positive | 3558161 - 3559378 | 44289.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
