Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00282 family metallophosphoesterase | DCP16_01295 | Not Available | Positive | 267522 - 268346 | 29406.0 |
| zn-dependent hydrolase | DCP16_01300 | Not Available | Positive | 268498 - 269328 | 30459.1 |
| general stress protein | DCP16_01305 | Not Available | Negative | 269420 - 269923 | 18891.2 |
| yebc/pmpr family dna-binding transcriptional regulator | DCP16_01310 | Not Available | Positive | 270129 - 270875 | 26701.2 |
| alkane 1-monooxygenase | DCP16_01315 | Not Available | Negative | 271082 - 272083 | 36267.5 |
| crossover junction endodeoxyribonuclease ruvc | DCP16_01320 | Not Available | Positive | 272295 - 272807 | 18115.1 |
| holliday junction branch migration protein ruva | DCP16_01325 | Not Available | Positive | 272860 - 273477 | 21272.7 |
| abrb/maze/spovt family dna-binding domain-containing protein | DCP16_01330 | Not Available | Positive | 273553 - 273834 | 9904.6 |
| pin domain-containing protein | DCP16_01335 | Not Available | Positive | 273831 - 274235 | 15027.4 |
| holliday junction branch migration dna helicase ruvb | DCP16_01340 | Not Available | Positive | 274232 - 275272 | 38142.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
