Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine kinase | DCP16_15685 | Not Available | Positive | 3330230 - 3331198 | 36164.4 |
| ribonuclease hi | DCP16_15690 | Not Available | Positive | 3331195 - 3331638 | 16476.5 |
| dabb family protein | DCP16_15695 | Not Available | Positive | 3331635 - 3332000 | 13233.8 |
| abc transporter substrate-binding protein | DCP16_15700 | Not Available | Negative | 3332084 - 3332980 | 32287.0 |
| zinc abc transporter permease | DCP16_15705 | Not Available | Negative | 3332997 - 3333869 | 29907.6 |
| abc transporter | DCP16_15710 | Not Available | Negative | 3333866 - 3334609 | 26761.2 |
| peroxiredoxin | DCP16_15715 | Not Available | Negative | 3334888 - 3335373 | 17027.2 |
| cytochrome c biogenesis protein | DCP16_15720 | Not Available | Negative | 3335460 - 3336305 | 30629.6 |
| yqge/algh family protein | DCP16_15725 | Not Available | Positive | 3336458 - 3337063 | 22065.4 |
| csbd family protein | DCP16_15730 | Not Available | Positive | 3337167 - 3337358 | 6379.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
