Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| invasion associated locus b family protein | DCP16_15635 | Not Available | Negative | 3321505 - 3322023 | 18486.3 |
| cytochrome c oxidase subunit ii | DCP16_15640 | Not Available | Positive | 3322391 - 3323251 | 31614.2 |
| cytochrome c oxidase subunit i | DCP16_15645 | Not Available | Positive | 3323269 - 3324972 | 62550.7 |
| protoheme ix farnesyltransferase | DCP16_15650 | Not Available | Positive | 3325089 - 3326042 | 33903.1 |
| hypothetical protein | DCP16_15655 | Not Available | Positive | 3326042 - 3326173 | 4779.1 |
| cytochrome c oxidase assembly protein | DCP16_15660 | Not Available | Positive | 3326201 - 3326809 | 22474.1 |
| cytochrome c oxidase subunit 3 | DCP16_15665 | Not Available | Positive | 3326919 - 3327803 | 33492.6 |
| hypothetical protein | DCP16_15670 | Not Available | Positive | 3327933 - 3328313 | 13757.2 |
| cytochrome c oxidase assembly protein | DCP16_15675 | Not Available | Positive | 3328306 - 3329058 | 27819.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DCP16_15680 | Not Available | Positive | 3329152 - 3330198 | 37529.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
