Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetoin utilization protein | DCP16_15530 | Not Available | Negative | 3303888 - 3304823 | 34301.6 |
| bioy family transporter | DCP16_15535 | Not Available | Negative | 3304859 - 3305422 | 18946.1 |
| transporter | DCP16_15540 | Not Available | Negative | 3305409 - 3306050 | 23170.0 |
| cobalt abc transporter atp-binding protein | DCP16_15545 | Not Available | Negative | 3306047 - 3306727 | 24401.7 |
| hypothetical protein | DCP16_15550 | Not Available | Positive | 3306840 - 3308072 | 47645.4 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | DCP16_15555 | Not Available | Negative | 3308069 - 3309169 | 40070.9 |
| chorismate synthase | DCP16_15560 | Not Available | Negative | 3309184 - 3310281 | 39545.0 |
| diguanylate cyclase | DCP16_15565 | Not Available | Negative | 3310413 - 3312776 | 88230.1 |
| duf1344 domain-containing protein | DCP16_15570 | Not Available | Positive | 3313095 - 3313355 | 9431.41 |
| hypothetical protein | DCP16_15575 | Not Available | Negative | 3313428 - 3313706 | 10080.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
