Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinoglycan biosynthesis protein | DCP16_15230 | Not Available | Negative | 3253276 - 3253854 | 21232.4 |
| two-component sensor histidine kinase | DCP16_15235 | Not Available | Positive | 3253963 - 3255498 | 56205.1 |
| diacylglycerol kinase | DCP16_15240 | Not Available | Negative | 3255500 - 3255919 | 15240.8 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | DCP16_15245 | Not Available | Negative | 3255927 - 3256952 | 34970.3 |
| adenosylcobinamide-gdp ribazoletransferase | DCP16_15250 | Not Available | Positive | 3257129 - 3257926 | 27705.5 |
| duf1289 domain-containing protein | DCP16_15255 | Not Available | Positive | 3257945 - 3258124 | 6515.9 |
| tigr02281 family clan aa aspartic protease | DCP16_15260 | Not Available | Positive | 3258121 - 3258828 | 24710.3 |
| abc transporter permease | DCP16_15265 | Not Available | Negative | 3258835 - 3259596 | 28124.2 |
| abc transporter atp-binding protein | DCP16_15270 | Not Available | Negative | 3259593 - 3260531 | 34212.5 |
| extensin | DCP16_15275 | Not Available | Negative | 3260935 - 3262104 | 42115.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
