Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mce family protein | DCP16_15080 | Not Available | Negative | 3218895 - 3220265 | 48665.0 |
| abc transporter atp-binding protein | DCP16_15085 | Not Available | Negative | 3220268 - 3221158 | 32354.1 |
| organic solvent abc transporter permease | DCP16_15090 | Not Available | Negative | 3221118 - 3222278 | 40813.2 |
| dipeptide epimerase | DCP16_15095 | Not Available | Positive | 3222424 - 3223407 | 35155.0 |
| udp-2,3-diacylglucosamine diphosphatase | DCP16_15100 | Not Available | Negative | 3223416 - 3224246 | 31369.5 |
| nadp-dependent malic enzyme | DCP16_15105 | Not Available | Positive | 3224479 - 3226794 | 83240.5 |
| hypothetical protein | DCP16_15110 | Not Available | Positive | 3227052 - 3228221 | 42360.6 |
| duf1127 domain-containing protein | DCP16_15115 | Not Available | Negative | 3228382 - 3228618 | 8830.7 |
| glutamate racemase | DCP16_15120 | Not Available | Negative | 3229086 - 3229907 | 30074.1 |
| rna methyltransferase | DCP16_15125 | Not Available | Negative | 3229885 - 3230718 | 30655.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
