Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc abc transporter substrate-binding protein | DCP16_14680 | Not Available | Positive | 3127831 - 3128883 | 37711.1 |
| 4-hydroxytetrahydrobiopterin dehydratase | DCP16_14685 | Not Available | Positive | 3128965 - 3130170 | 44476.8 |
| hypothetical protein | DCP16_14690 | Not Available | Negative | 3130221 - 3130550 | 12917.8 |
| l-glyceraldehyde 3-phosphate reductase | DCP16_14695 | Not Available | Negative | 3130742 - 3131776 | 38303.3 |
| beta-mannosidase | DCP16_14700 | Not Available | Negative | 3131863 - 3134319 | 92101.2 |
| laci family transcriptional regulator | DCP16_14705 | Not Available | Positive | 3134796 - 3135848 | 38603.2 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | DCP16_14710 | Not Available | Negative | 3135857 - 3137371 | 52797.1 |
| nitrogen regulatory protein p-ii | DCP16_14715 | Not Available | Positive | 3137721 - 3138059 | 12253.8 |
| type i glutamate--ammonia ligase | DCP16_14720 | Not Available | Positive | 3138126 - 3139535 | 52103.2 |
| eama/rhat family transporter | DCP16_14725 | Not Available | Positive | 3139696 - 3140613 | 32880.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
