Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCP16_14630 | Not Available | Negative | 3117794 - 3118051 | 9546.78 |
| single-stranded dna-binding protein | DCP16_14635 | Not Available | Negative | 3118164 - 3118706 | 18950.8 |
| excinuclease abc subunit uvra | DCP16_14640 | Not Available | Positive | 3119029 - 3121950 | 106994.0 |
| duf72 domain-containing protein | DCP16_14645 | Not Available | Positive | 3121995 - 3122795 | 29686.4 |
| trna dihydrouridine(20/20a) synthase dusa | DCP16_14650 | Not Available | Negative | 3122807 - 3123835 | 37661.1 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | DCP16_14655 | Not Available | Positive | 3124277 - 3124966 | 24475.4 |
| gamma carbonic anhydrase family protein | DCP16_14660 | Not Available | Positive | 3124995 - 3125522 | 18609.3 |
| transcriptional repressor | DCP16_14665 | Not Available | Negative | 3125559 - 3125975 | 15376.3 |
| zinc abc transporter permease subunit znub | DCP16_14670 | Not Available | Negative | 3125975 - 3126790 | 28737.6 |
| zinc abc transporter atp-binding protein | DCP16_14675 | Not Available | Negative | 3126783 - 3127727 | 34056.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
