Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | DCP16_14275 | Not Available | Positive | 3042165 - 3042716 | 20130.2 |
| hypothetical protein | DCP16_14280 | Not Available | Positive | 3043278 - 3043694 | 15798.0 |
| chloride channel protein | DCP16_14290 | Not Available | Negative | 3044924 - 3046705 | 62827.5 |
| phosphoribosyl 1,2-cyclic phosphodiesterase | DCP16_14295 | Not Available | Negative | 3046724 - 3047554 | 31065.8 |
| luxr family transcriptional regulator | DCP16_14300 | Not Available | Negative | 3047558 - 3048340 | 28833.3 |
| methionine--trna ligase | DCP16_14305 | Not Available | Negative | 3048349 - 3049899 | 58001.6 |
| dna polymerase iii subunit delta' | DCP16_14310 | Not Available | Negative | 3049994 - 3051019 | 36878.1 |
| dtmp kinase | DCP16_14315 | Not Available | Negative | 3051016 - 3051684 | 24545.2 |
| d-alanyl-d-alanine carboxypeptidase | DCP16_14320 | Not Available | Negative | 3051794 - 3052966 | 42148.6 |
| septal ring lytic transglycosylase rlpa family protein | DCP16_14325 | Not Available | Negative | 3053077 - 3054132 | 37228.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
