Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| patatin | DCP16_13970 | Not Available | Negative | 2983383 - 2984333 | 33917.2 |
| phosphoribosyl-amp cyclohydrolase | DCP16_13975 | Not Available | Negative | 2984437 - 2984898 | 16779.6 |
| gtp cyclohydrolase i fole | DCP16_13980 | Not Available | Negative | 2984931 - 2985557 | 22909.6 |
| iron-sulfur cluster assembly scaffold protein | DCP16_13985 | Not Available | Positive | 2985831 - 2986277 | 16115.2 |
| membrane protein insertion efficiency factor yidd | DCP16_13990 | Not Available | Positive | 2986282 - 2986644 | 13316.1 |
| duf2267 domain-containing protein | DCP16_13995 | Not Available | Positive | 2986654 - 2987088 | 16316.5 |
| threonine--trna ligase | DCP16_14000 | Not Available | Positive | 2987198 - 2989207 | 75578.9 |
| hypothetical protein | DCP16_14005 | Not Available | Negative | 2989305 - 2990285 | 34562.1 |
| nitroreductase | DCP16_14010 | Not Available | Positive | 2990394 - 2990975 | 21358.7 |
| flavin reductase | DCP16_14015 | Not Available | Positive | 2990975 - 2991580 | 21663.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
