Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase accessory protein ccog | DCP16_13870 | Not Available | Positive | 2962579 - 2964162 | 59070.9 |
| cation transporter | DCP16_13875 | Not Available | Positive | 2964159 - 2964659 | 18036.7 |
| cadmium-translocating p-type atpase | DCP16_13880 | Not Available | Positive | 2964656 - 2966956 | 81422.4 |
| cbb3-type cytochrome oxidase assembly protein ccos | DCP16_13885 | Not Available | Positive | 2966953 - 2967108 | 5574.77 |
| phosphogluconate dehydrogenase (nadp(+)-dependent, decarboxylating) | DCP16_13890 | Not Available | Positive | 2967241 - 2968677 | 51561.0 |
| glxa family transcriptional regulator | DCP16_13895 | Not Available | Negative | 2968886 - 2969920 | 38370.3 |
| response regulator | DCP16_13900 | Not Available | Positive | 2970287 - 2970712 | 15076.2 |
| glycogen debranching enzyme glgx | DCP16_13905 | Not Available | Negative | 2970820 - 2972895 | 77819.0 |
| hypothetical protein | DCP16_13910 | Not Available | Negative | 2973032 - 2973232 | 7712.43 |
| lysr family transcriptional regulator | DCP16_13915 | Not Available | Positive | 2973471 - 2974379 | 33392.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
