Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor domain-containing phosphodiesterase | DCP16_13820 | Not Available | Positive | 2952954 - 2954732 | 66461.7 |
| hypothetical protein | DCP16_13825 | Not Available | Negative | 2954757 - 2955716 | 35040.7 |
| duf599 domain-containing protein | DCP16_13830 | Not Available | Negative | 2955795 - 2956481 | 26059.0 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | DCP16_13835 | Not Available | Positive | 2957023 - 2957547 | 19333.3 |
| hypothetical protein | DCP16_13840 | Not Available | Positive | 2957780 - 2958457 | 24449.2 |
| cytochrome-c oxidase, cbb3-type subunit i | DCP16_13845 | Not Available | Positive | 2958624 - 2960246 | 61052.4 |
| cytochrome-c oxidase, cbb3-type subunit ii | DCP16_13850 | Not Available | Positive | 2960258 - 2960989 | 27119.3 |
| ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperone | DCP16_13855 | Not Available | Positive | 2961002 - 2961154 | 5520.83 |
| cytochrome-c oxidase, cbb3-type subunit iii | DCP16_13860 | Not Available | Positive | 2961159 - 2962022 | 30916.3 |
| polyketide cyclase | DCP16_13865 | Not Available | Negative | 2962065 - 2962466 | 14634.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
