Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s4 | DCP16_13290 | Not Available | Positive | 2859702 - 2860319 | 23573.4 |
| phosphoglycolate phosphatase | DCP16_13295 | Not Available | Negative | 2860440 - 2861129 | 24907.1 |
| ribose 5-phosphate isomerase a | DCP16_13300 | Not Available | Positive | 2861479 - 2862177 | 24438.8 |
| hypothetical protein | DCP16_13305 | Not Available | Positive | 2862195 - 2862791 | 20353.4 |
| glutathione-disulfide reductase | DCP16_13310 | Not Available | Positive | 2863003 - 2864391 | 50152.2 |
| lysr family transcriptional regulator | DCP16_13315 | Not Available | Negative | 2864369 - 2865277 | 33527.3 |
| 3-deoxy-7-phosphoheptulonate synthase class ii | DCP16_13320 | Not Available | Positive | 2865776 - 2867152 | 50944.5 |
| hypothetical protein | DCP16_13325 | Not Available | Negative | 2867220 - 2869046 | 63213.7 |
| hypothetical protein | DCP16_13330 | Not Available | Negative | 2868952 - 2869356 | 14785.9 |
| type i methionyl aminopeptidase | DCP16_13340 | Not Available | Negative | 2870407 - 2871237 | 30072.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
