Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytoene/squalene synthase family protein | DCP16_13180 | Not Available | Positive | 2837529 - 2838377 | 31053.4 |
| hypothetical protein | DCP16_13185 | Not Available | Positive | 2838631 - 2839113 | 17650.0 |
| fadh(2)-oxidizing methylenetetrahydrofolate--trna-(uracil(54)-c(5))- methyltransferase trmfo | DCP16_13190 | Not Available | Negative | 2839065 - 2840534 | 52457.9 |
| hypothetical protein | DCP16_13195 | Not Available | Positive | 2840645 - 2840833 | 6778.35 |
| duf1127 domain-containing protein | DCP16_13200 | Not Available | Negative | 2840830 - 2840973 | 5468.56 |
| is110 family transposase | DCP16_13205 | Not Available | Negative | 2841332 - 2842252 | 33948.8 |
| duf1127 domain-containing protein | DCP16_13210 | Not Available | Negative | 2842578 - 2842724 | 5623.79 |
| Trna-leu | Not Available | Not Available | Positive | 2843278 - 2843362 | Not Available |
| trigger factor | DCP16_13220 | Not Available | Positive | 2843551 - 2845026 | 54058.9 |
| hypothetical protein | DCP16_13230 | Not Available | Positive | 2846103 - 2846756 | 23496.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
