Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | DCP16_13030 | Not Available | Positive | 2805234 - 2806430 | 43358.9 |
| amino acid abc transporter permease | DCP16_13035 | Not Available | Positive | 2806436 - 2807593 | 42484.4 |
| amino acid abc transporter atp-binding protein | DCP16_13040 | Not Available | Positive | 2807605 - 2808378 | 29217.8 |
| universal stress protein | DCP16_13045 | Not Available | Negative | 2808451 - 2809296 | 30533.3 |
| competence/damage-inducible protein a | DCP16_13050 | Not Available | Negative | 2809416 - 2810189 | 27610.1 |
| nad(p)h:quinone oxidoreductase type iv | DCP16_13055 | Not Available | Positive | 2810435 - 2811034 | 20843.7 |
| duf982 domain-containing protein | DCP16_13060 | Not Available | Negative | 2811509 - 2811754 | 8686.28 |
| hypothetical protein | DCP16_13065 | Not Available | Negative | 2811827 - 2812117 | 10776.0 |
| hypothetical protein | DCP16_13070 | Not Available | Negative | 2812183 - 2812806 | 23090.2 |
| Trna-cys | Not Available | Not Available | Positive | 2812925 - 2812998 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
