Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCP16_12780 | Not Available | Positive | 2754843 - 2755088 | 9256.27 |
| amino acid abc transporter substrate-binding protein | DCP16_12785 | Not Available | Negative | 2755234 - 2756130 | 33228.9 |
| amino acid abc transporter substrate-binding protein | DCP16_12790 | Not Available | Negative | 2756133 - 2757041 | 33447.1 |
| ggdef domain-containing protein | DCP16_12795 | Not Available | Negative | 2757085 - 2759295 | 80488.0 |
| 5,10-methylenetetrahydrofolate reductase | DCP16_12800 | Not Available | Positive | 2759558 - 2760490 | 33544.3 |
| n-acetylglucosamine kinase | DCP16_12805 | Not Available | Negative | 2760524 - 2761438 | 31278.9 |
| n-acetylglucosamine-6-phosphate deacetylase | DCP16_12810 | Not Available | Negative | 2761435 - 2762616 | 40839.5 |
| aminotransferase | DCP16_12815 | Not Available | Negative | 2762613 - 2763635 | 35356.6 |
| gntr family transcriptional regulator | DCP16_12820 | Not Available | Negative | 2763659 - 2764408 | 27448.4 |
| oxidoreductase | DCP16_12825 | Not Available | Positive | 2764879 - 2766057 | 43351.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
