Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| valine--trna ligase | DCP16_12070 | Not Available | Negative | 2599528 - 2602455 | 109864.0 |
| hypothetical protein | DCP16_12075 | Not Available | Negative | 2602562 - 2605963 | 120596.0 |
| peroxiredoxin | DCP16_12080 | Not Available | Positive | 2606139 - 2606606 | 16571.8 |
| duf455 domain-containing protein | DCP16_12085 | Not Available | Positive | 2606631 - 2607452 | 30494.7 |
| peptidase | DCP16_12090 | Not Available | Positive | 2607525 - 2608787 | 45274.0 |
| rna helicase | DCP16_12095 | Not Available | Positive | 2608976 - 2610478 | 55726.8 |
| dna mismatch repair protein mutt | DCP16_12100 | Not Available | Positive | 2610478 - 2610888 | 15009.8 |
| branched-chain amino acid abc transporter substrate-binding protein | DCP16_12105 | Not Available | Positive | 2611038 - 2612111 | 38032.7 |
| ribulose-phosphate 3-epimerase | DCP16_12110 | Not Available | Positive | 2612251 - 2612928 | 23463.3 |
| adenylosuccinate lyase | DCP16_12115 | Not Available | Positive | 2613043 - 2614350 | 48671.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
