Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 2524224 - 2524300 | Not Available |
| nadh-ubiquinone oxidoreductase | DCP16_11720 | Not Available | Negative | 2524332 - 2524637 | 11825.0 |
| Trna-pro | Not Available | Not Available | Positive | 2525383 - 2525459 | Not Available |
| efflux rnd transporter periplasmic adaptor subunit | DCP16_11730 | Not Available | Positive | 2525719 - 2527017 | 46097.6 |
| macrolide abc transporter atp-binding protein | DCP16_11735 | Not Available | Positive | 2527032 - 2527754 | 26181.6 |
| multidrug abc transporter substrate-binding protein | DCP16_11740 | Not Available | Positive | 2527744 - 2528952 | 42486.9 |
| transcription elongation factor grea | DCP16_11745 | Not Available | Positive | 2529026 - 2529508 | 17497.5 |
| metal-dependent hydrolase | DCP16_11750 | Not Available | Positive | 2529584 - 2530519 | 33623.9 |
| fe-s cluster assembly scaffold sufa | DCP16_11755 | Not Available | Negative | 2530588 - 2530977 | 13651.4 |
| suf system fe-s cluster assembly protein | DCP16_11760 | Not Available | Negative | 2531088 - 2531495 | 14542.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
