Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter substrate-binding protein | DCP16_11555 | Not Available | Negative | 2488349 - 2489377 | 36369.2 |
| dna-binding response regulator | DCP16_11560 | Not Available | Positive | 2489593 - 2490339 | 27626.3 |
| two-component sensor histidine kinase | DCP16_11565 | Not Available | Positive | 2490336 - 2492465 | 76707.1 |
| hypothetical protein | DCP16_11570 | Not Available | Positive | 2492597 - 2494606 | 72734.6 |
| hypothetical protein | DCP16_11575 | Not Available | Negative | 2494832 - 2496124 | 47636.0 |
| gtp-binding protein | DCP16_11580 | Not Available | Negative | 2496285 - 2497415 | 41367.6 |
| d-alanyl-d-alanine carboxypeptidase | DCP16_11585 | Not Available | Negative | 2497528 - 2498583 | 37141.8 |
| amidohydrolase | DCP16_11590 | Not Available | Positive | 2498808 - 2499971 | 41941.8 |
| is481 family transposase | DCP16_11595 | Not Available | Negative | 2500414 - 2501604 | 45385.8 |
| heme-binding protein | DCP16_11600 | Not Available | Negative | 2502032 - 2502457 | 14388.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
